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R

Trending R repositories on GitHub β€” ranked by total activity score (stars, forks, pushes, PRs) over the past month.

50
Trending Repos
792
Total Stars
152
Total Forks

πŸ”₯ Trending R Repos β€” Past Month

Rank
Repository
Stars
Forks
1
1
Misterursw/interactive_modify_figures_from_python
447
34
⭐ 447🍴 34
2
2
posit-dev/skills

A collection of Claude Skills from Posit

39
7
⭐ 39🍴 7
3
3
RConsortium/pharma-skills

A collection of agent skills for BioPharma use cases GSDBench Intake https://rconsortium.github.io/pharma-skills/gsdbench-intake/

9
3
⭐ 9🍴 3
4
4
avehtari/Bayesian-Workflow

Bayesian Workflow book code and case studies

7
6
⭐ 7🍴 6
5
5
GeneticistHere/ggplot2-20-journal-cases
6
2
⭐ 6🍴 2
6
6
RobsonTigre/everyday-ci

R & Python code and datasets for Everyday Causal Inference β€” a free book on experiments, DiD, IV, RDD, and causal time series for business

3
1
⭐ 3🍴 1
7
7
SoheilGtex/R-Mathematical-Software

Official repository for assignment submissions, open-source educational projects, and code benchmarks for Mathematical Software & R Programming courses (Kharazmi University, 2026).

1
0
⭐ 1🍴 0
8
8
YuLab-SMU/aisdk

πŸ€– A production-grade framework for building AI-powered applications in R.

1
0
⭐ 1🍴 0
9
9
Hinna0818/Bioinfo-SMU

πŸ§€ Miscellaneous and useful learning materials for Bioinformatics-ers at Southern Medical University.

1
0
⭐ 1🍴 0
10
10
hadley/r4ds

R for data science: a book

31
18
⭐ 31🍴 18
11
11
ajcanepa/PRACTICAS_BBDD_GIS

Repositorio para el cΓ³digo y recursos de las prΓ‘cticas de la asignatura "Bases de Datos", del Grado en IngenierΓ­a de la Salud de la UBU.

8
22
⭐ 8🍴 22
12
12
openbiox/Bizard

Bizard: A Biomedical Visualization Atlas. https://openbiox.github.io/Bizard/

17
2
⭐ 17🍴 2
13
13
nflverse/nflverse-data

Automated nflverse data repository

27
7
⭐ 27🍴 7
14
14
mengxu98/scop

An R package for single-cell and spatial omics analysis, integration, interpretation, and visualization.

7
2
⭐ 7🍴 2
15
15
posit-dev/btw

A complete toolkit for connecting R and LLMs

6
4
⭐ 6🍴 4
16
16
posit-dev/mcptools

Model Context Protocol For R

5
3
⭐ 5🍴 3
17
17
scienceverse/metacheck

Check Research Outputs for Best Practices

3
0
⭐ 3🍴 0
18
18
posit-dev/plumber2

Easy and Powerful Webservers in R

1
2
⭐ 1🍴 2
19
19
DrCytometer/AutoSpectral

Tools for Unmixing Spectral Flow Cytometry Data

2
1
⭐ 2🍴 1
20
20
selcukorkmaz/fastml

Guarded Resampling for Safe and Automated Machine Learning in R

2
0
⭐ 2🍴 0
21
21
irlcode/RFSD

The Russian Financial Statements Database (RFSD) is an open, harmonized collection of annual unconsolidated financial statements of the universe of Russian firms in 2011-2025. It is the first open data set with information on every active firm in the country, including non-filing firms.

2
0
⭐ 2🍴 0
22
22
tidyverse/ragnar

RAG in R

1
1
⭐ 1🍴 1
23
23
t-kalinowski/quickr

R to Fortran Transpiler

1
0
⭐ 1🍴 0
24
24
fastverse/fastverse

An Extensible Suite of High-Performance and Low-Dependency Packages for Statistical Computing and Data Manipulation in R

17
3
⭐ 17🍴 3
25
25
tidyverse/ggplot2

An implementation of the Grammar of Graphics in R

17
7
⭐ 17🍴 7
26
26
gesiscss/awesome-computational-social-science

A list of awesome resources for Computational Social Science

11
0
⭐ 11🍴 0
27
27
ipea/geocodebr

GeolocalizaΓ§Γ£o de EndereΓ§os Brasileiros (Geocoding Brazilian Addresses)

3
4
⭐ 3🍴 4
28
28
tidyverse/ellmer

Call LLM APIs from R

3
2
⭐ 3🍴 2
29
29
vincentarelbundock/tinytable

Simple and Customizable Tables in `R`

5
0
⭐ 5🍴 0
30
30
nflverse/nfldata

NFL Data (by Lee Sharpe)

13
2
⭐ 13🍴 2
31
31
vincentarelbundock/marginaleffects

R package to compute and plot predictions, slopes, marginal means, and comparisons (contrasts, risk ratios, odds, etc.) for over 100 classes of statistical and ML models. Conduct linear and non-linear hypothesis tests, or equivalence tests. Calculate uncertainty estimates using the delta method, bootstrapping, or simulation-based inference

15
0
⭐ 15🍴 0
32
32
nfidd/nfidd

Course on nowcasting and forecasting of infectious disease dynamics

3
0
⭐ 3🍴 0
33
33
walkerke/mapgl

R interface to Mapbox GL JS v3 and Maplibre GL JS

1
3
⭐ 1🍴 3
34
34
nmfs-ost/stockplotr

R package that contains general tables and figures such as standard objects in an assessment report, and other important visualizations to interpret results of stock assessment models.

1
2
⭐ 1🍴 2
35
35
satijalab/seurat

R toolkit for single cell genomics

17
0
⭐ 17🍴 0
36
36
r-lib/cli

Tools for making beautiful & useful command line interfaces

12
5
⭐ 12🍴 5
37
37
duckdb/duckdb-r

The duckdb R package

5
2
⭐ 5🍴 2
38
38
nflverse/nflverse-pbp

builds play by play and player stats for nflverse/nflverse-data

11
2
⭐ 11🍴 2
39
39
ipea/enderecobr

Pacote de R para padronizar endereΓ§os brasileiros

1
1
⭐ 1🍴 1
40
40
WangLabCSU/faers

R interface for FDA Adverse Event Reporting System

2
0
⭐ 2🍴 0
41
41
digitalcytometry/cytotrace2

CytoTRACE 2 is an interpretable AI method for predicting cellular potency and absolute developmental potential from scRNA-seq data.

1
1
⭐ 1🍴 1
42
42
Breeding-Insight/BIGapp

The BIG app is a user-friendly R Shiny app to analyze genomic data without needing to use command-line tools and works across different species ploidy.

1
1
⭐ 1🍴 1
43
43
biobakery/maaslin3

MaAsLin3: Microbiome Multivariate Association with Linear Models

1
0
⭐ 1🍴 0
44
44
Research-Division/policy-rules-database
1
0
⭐ 1🍴 0
45
45
liubingdong/EasyMultiProfiler

The EasyMultiProfiler package aims to offer a user-friendly and efficient multi-omics data analysis tool on the R platform. It facilitates various essential tasks related to microbiome, genome, and metabolite downstream analysis, providing a seamless workflow from start to finish.

1
0
⭐ 1🍴 0
46
46
cailab-tamu/scTenifoldKnk

R/MATLAB package to perform virtual knockout experiments on single-cell gene regulatory networks.

12
0
⭐ 12🍴 0
47
47
grantmcdermott/tinyplot

Lightweight extension of the base R graphics system

5
1
⭐ 5🍴 1
48
48
julianhinz/KITE

KITE β€” Kiel Institute Trade Policy Evaluation Model

1
0
⭐ 1🍴 0
49
49
scverse/anndataR

AnnData interoperability in R

4
1
⭐ 4🍴 1
50
50
tidy-finance/r-tidyfinance

R package with helper functions for developers and researchers familiar with Tidy Finance

1
0
⭐ 1🍴 0

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